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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs146269924 chr6:36002757 C/G 9.5E-10 407 15.6 15.17 6.15 KM Plot
LGG rs146346319 chr16:67792739 A/AG 2.27E-11 406 15.17 18.37 6.47 KM Plot
LGG rs146423352 chr6:36027440 T/TTTG 1.41E-9 402 15.57 15.13 6.15 KM Plot
LGG rs1464922 chr7:6697451 C/A 3.77E-7 403 15.17 17.25 4.82 KM Plot
LGG rs1464923 chr7:6697232 C/T 4.44E-7 402 15.18 16.05 4.82 KM Plot
LGG rs146506032 chr5:156037515 G/A 2.6E-5 407 16.67 14.43 11.17 KM Plot
LGG rs146640409 chr10:97613883 T/C 0.000169 404 15.05 16.27 17.88 KM Plot
LGG rs146680189 chr6:35993892 GC/G 9.5E-10 407 15.6 15.17 6.15 KM Plot
LGG rs146763045 chr15:31958635 A/C 0.000167 402 15.77 15.2 11.8 KM Plot
LGG rs1468147 chr7:95266209 C/T 6.85E-5 407 15.33 11.53 19.2 KM Plot
LGG rs146826079 chr14:20751807 T/C 2.22E-5 394 15.68 15.63 8.75 KM Plot
LGG rs146908680 chr5:156037688 G/A 1.84E-5 407 15.6 15.17 11.63 KM Plot
LGG rs147059615 chr6:36055675 A/G 9.31E-10 407 15.63 15.15 6.15 KM Plot
LGG rs147076485 chr2:48910477 G/GA 0.000186 403 15.13 17.77 30 KM Plot
LGG rs147145017 chr7:5078134 G/A 0.000215 403 15.37 14.53 12.03 KM Plot